Repo_pr-2025-00432j
Published: 12 December 2025| Version 1 | DOI: 10.17632/2phgdzg9mg.1
Contributors:
, , Description
Here a section of a human papillary thyroid carcinoma, analysed with MALDI-MSI and H&E stained. The dataset includes: -H&E stained WSI (ptc_core_tma_q3.tif); -ROIs (geojson); SCiLS exchange format ROIs (SEF.zip); -imzML of the differnt ROIs (imzML.zip). The ROIs were obtained using the workflow presented in "Improving the annotation for Spatial Proteomics: A computational approach to enhance molecular characterization of Thyroid Nodules" . A detailed description and scripts can be found at https://github.com/Vsc0/msi-enhanced .
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Institutions
University of Milano-Bicocca
Departments
School of Medicine and Surgery, Department of Informatics, Systems and Communication
Categories
Histology, Pathology, Mass Spectrometry, Image Analysis (Medical Imaging)
Additional Metadata for University of Milano - Bicocca
| Date the data was collected | 2025-09-22T22:00:00.000Z |
| ERC Keywords | LS2_12 Bioinformatics, LS1_2 Biochemistry, LS7_1 Imaging for medical diagnosis |
| SSD Classification | BIO/10 - BIOCHIMICA, INF/01 - INFORMATICA, MED/08 - ANATOMIA PATOLOGICA |
| Geolocation | Italy |